Biopolymer
™
Manual
General Information
Biopolymer Index
Introduction
What's New
License Requirements
View or Print this Manual
Introduced as MENDYL 1.0 (1987)
Revised for SYBYL 8.0 (Late 2007)
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D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
Tutorials
Theory
Protein Preparation Tutorial
Peptide Building Tutorial
Biopolymer Displays Tutorial
Manipulating Sets Tutorial
Protein Loop Search Tutorial
Monomer Definition Tutorial
Annealing Tutorial
(Force Field Manual)
Introduction
Force Field Methods
Protein Modeling
Nucleic Acid Modeling
Polysaccharide Modeling
Biopolymer Recommended Reading
Graphical Interface
Commands
Biopolymer Menu Layout
List of Biopolymer Dialogs
The Sequence Viewer
Biopolymer Commands
Using Biopolymer
Reference
Read and Write Biopolymer Files
Biopolymer Display
Define and Apply Protein View Settings
Prepare Biopolymer Structure
Build Biopolymer
Biopolymer Composition
Biopolymer Conformation
Protein Loop Search
Compare Biopolymer Sequences
Compare Biopolymer Structures
Search Protein Database
Biopolymer Dictionary & Database Administration
Biopolymer Dictionary
Manage Custom Dictionary
Create or Modify a Monomer
Create/Update the PRODAT Database
Associated Tailor Variables
BIOPOLYMER
CONSTR UCT_BACKBONE
FORCE_FIELD
HBONDS
PDB
PROTEIN_LOOP
PROTEIN_SE ARCH
RAMACHANDRAN
RENDER
RIBBON
SCAN
TWEAK
Biopolymer Files
Biopolymer Dictionaries
Protein Homology Matrix Files
Biopolymer Loop Files
Secondary Structure Prediction Files
Common Biopolymer File Formats
SPL Expression Generators
(SPL Manual)
Online Resources
Technical Support Online
Search the Knowledgebase
Download SPL Scripts
Download Maintenance Releases
World-Wide Support Offices
Scientific Citations
Training Courses
Copyright © 2007, Tripos, L.P. All rights reserved.
