SYBYL^® Basics Manual

General

SYBYL Basics Index

License Requirements for SYBYL Basics

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SYBYL Introduced: SYBYL 1.0 (1982)

Revised: SYBYL 8.0 (Late 2007)

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X

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Tutorials

Objects and Expressions

Quick Introduction to SYBYL Tutorial

Atom Selection Tutorial

Bond Selection Tutorial

Substructure Selection Tutorial

Small Molecule Sketching Tutorial

Ring Fusion Tutorial

Database Tutorial

Definitions of SYBYL Objects

Get Information on SYBYL Objects

Formats for Specifying Objects

Create Expressions

Select Atoms, Bonds, or Substructures

General Description of the Expression Dialogs

Graphical Interface

Commands

SYBYL's Main Window

Textport Window

List of Dialogs

List of Basic Commands

DATABASE Command

The MODE Command

Execute a Command on Multiple Molecules

Monitor Performance of SYBYL Command

Using SYBYL

SYBYL Sessions

Start/Exit SYBYL

Open and Save Files of Molecules

Understand Molecule and Display Areas

Rotate and Move Molecules

Build and Modify Molecules

Get Measurements

Select Atoms, Bonds, or Substructures

Clear and Reset the SYBYL Display

Restore a Saved Session

Delete a Saved Session

Record and Play SYBYL Sessions

Sketch/Modify Molecules

Molecule Databases

Access the Sketcher

Sketching Techniques

Sketcher Menu Items

Modify Molecules Outside of Sketcher

Create/Modify Features

Open/Close Databases

Obtain Information on Databases

Retrieve Molecules

Managing Database Content

Save Database Molecules to Mol2 Files

Sets in SYBYL

Reference

Introduction to Sets

Global Sets in the Biopolymer macromol Dictionary

SYBYL Quick Reference

Selection How Tos

Keyboard Shortcuts

Control Characters (Textport)

Menubar Shortcuts and Comments

SPL Expression Generators (SPL Manual)

Online Resources
Technical Support Online Search the Knowledgebase Download SPL Scripts Download Software Maintenance Releases	World-Wide Support Offices Scientific Citations Training Courses

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