R: Sub Index for SYBYL and UNITY Documentation

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Numerics A B C D E F G H I J K L M N O P Q R S Symbols T U V W X Z

R group
R group
R group
r2
definition
typical values
RACHEL
chemical descriptors
adding
ATOMS
ATTACH
ATYPES
BONDS
LINKS
MW
PHARM
RATOMS
RBONDS
tutorial
component database
adding structures
building blocks
creating
opening
selection system
tutorial
viewing
creating a project
graphical interface
introduction
project setup
pseudo receptor
receptor cavity
scoring functions
automated elucidation
editing parameters
focused
generalized
importing parameters
predicting
target function
training function
tutorial
search parameters
editing
importing
search status
theory
tutorials
utilities
Radius
select within
Radius of gyration
Radius of gyration
column type
Ramachandran graph
Ramachandran graph
example
TAILOR
Ramachandran graph
Ramps
Random conformational search
background reading
command
dialog box
TAILOR
TAILOR MAXIMIN2
tutorial
Random sequence
in biopolymers
Range
column type
Range constraint
data record in mol2 file
define
energy term, Tripos
Range rules file
Rank hits
RATOMS descriptor
Rawatom, adding
RBONDS descriptor
RCSB
retrieving file from site
RDF file
customizing
defining
Reactant in Legion
getting from file
multiple cores
permuting
Read molecule
fragment library
Read/save database molecules
Reading
a model
Receptor
Pseudo receptor
view cavity
Receptor cavity
Receptor cavity
Receptor cavity
Receptor site
Receptor site
Receptor site
Reciprocal Nearest Neighbor clustering
command format
packing selection
setting in Selector
theory
theory
TAILOR
Recognition site
Recording
COLLECT command
COLLECT command
PHOTO command
PHOTO command
Recover contents of molecule area
Recovery ratio
References
SLN
stereochemistry
Tuplets
CScore
FlexX
Surflex-Dock
AMBER force field
charge calculation
Del Re
Gasteiger-Marsili
Hückel
Pullman
charge derivation for biopolymers
dynamics
Kollman force field
line search methods
MMFF94 force field
molecular mechanics
Molecular Silverware
solvation
Tripos force field
Tripos parameter table
FUGUE
GALAHAD
GASP
HQSAR
deconvolution libraries
MOLCAD
cavity depth
ClogP
CMR
ORCHESTRAR
fitting atoms
matching atoms
superimposing atoms
ProTable
QSAR
molecular orbital theory
QCPE programs
quantum chemistry
conformational analysis
GA conformational search
random conformational search
systematic conformational search
diversity metrics
Selector
FlexS
Surflex-Sim
Topomer Search
Kollman force field
loop search method
Tripos force field
chirality assignment
SHAKE algorithm
biopolymers
Protein Data Bank
rendering
rotamer libraries
CRYSIN
SLN
stereochemistry
Refine
models, using DISCOtech
models, using GASP
Tuplet hypothesis
models, using DISCOtech
models, using GASP
models, using DISCOtech
models, using GASP
Reflect atoms
Region
in QSAR
Region focusing
command format
dialog
tutorial
Register
REGISTER
compounds
syb3dbserver
Registrar creation
Regkey lists
Regression
Regulated Access
tps
REG_T type
REG_TAB
Reinstall
AdminTools
Relate points between graphs
Relationships
schema table
Relative stereochemistry
Relative stereochemistry
Relative stereochemistry
Relax hits
Relaxation
Relaxed mode
Release licenses
syb3dbserver
Remote console
Remove
aggregate
constraints
angle
distance
range
torsion
TAILOR
all atom attribute
all bond attribute
atom
bond
center of mass
centroid
extension point
global set
line
local set
non query atoms
normal
plane
stereo atom attribute
stereo bond attribute
substructure
UNITY feature
molecule definition items
dataset
Render
molecule areas
TAILOR
secondary structure settings
Renumber
RENUMBER
in biopolymers
Repair database
Replace chain
Report
database statistics
Requirements
system
Reset
icon
rotations and translations
Reset the screen
Residual
appending to table
definition
plot
Residue
adding to a dictionary
definition of new monomer in dictionary
inserting in a chain
saving in a dictionary
Residues
select by conformational state
Resize
dynamic hydrogen bonds
static hydrogen bonds
Restack icon
Restore
SYBYL session
Restore from stack
undo
Results
files
saving
saving
Results Browser
customizing
customizing
Retrieve molecules
Reverse highlights for surfaces
RGROUP versus Markush
Ribbon
surfaces
batch
creating
tutorial
TAILOR
biopolymer
Rigid alignment
Rigid alignment
Rigid alignment
Rigid structure
Rigid Superposition
flowchart
Ring
conformation
grid searching
multisearch
random searching
systematic search
flexing
flexible search
built-in set
fusion
list
ring fusion tutorial
SYBYL object definition
Ring closure
Ring closure
Ring closure
data record in mol2 file
Ring closure
Ring closure
Ring count
SLN_OPS method
SLN_T method
Ring search
Ring similarity measurement
Ring variance
RMSD
local fitting of conformers
RNA
building
modeling
building a double helix
building single strands
RNA global set
Robert Pearlman
Role names
Roles
AUSPYX roles
Oracle roles
Root atom
Rotamer libraries in biopolymers
Dunbrack
file format
Rotatable bond
Rotatable bond
flexible search
data record in mol2 file
Rotatable bond count
SLN_OPS method
SLN_T method
Rotatable bonds
unlabel
Rotation
of hits
of images
of molecules
Row
computation on molecular structures
deleting
dynamics sets
expressions
examples
hiding
marking as interesting
modifying
moving
naming
naming convention
QSAR
resizing row height
right-click menu
selecting in table
selecting via the menubar
selection dialog
widening labels
names
Row number column type
RS isomerism
RULER
RULER
Ruler
use in QSAR
Rules
management
replace fingerprint rules
table creation
table population
Run options
Running without Trigo
run_blast
run_fugue
Rx atom
Rx atom
Rx atom

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Numerics A B C D E F G H I J K L M N O P Q R S Symbols T U V W X Z


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